Keto Pepperoni Pizza Muffins (Low-Carb)

Snacks

March 9, 2026

Who says you can’t have pizza on a low-carb diet? Say goodbye to cravings with these incredible Keto Pepperoni Pizza Muffins! They’re bursting with savory Italian flavors, loaded with gooey cheese, and packed with zesty pepperoni in every single bite. Perfect for a quick dinner, a grab-and-go lunch, or a satisfying snack, these little bites deliver all the pizza goodness without the carbs. Let’s get baking!

Ingredients

• (Serves 4, makes 12 muffins)
• 3 oz / 85g ground flax seed
• 1 ½ tsp baking powder
• 2 tbsp Italian seasoning
• 8 large eggs, lightly beaten
• 8 oz / 225g shredded mozzarella cheese
• ½ cup / 50g grated Parmesan cheese
• 7 oz / 200g pepperoni, finely diced
• Salt and freshly ground black pepper, to taste

Instructions

1. Preheat your oven to 375°F (190°C). Thoroughly grease a 12-cup muffin tin or line it with silicone liners.
2. In a large bowl, whisk together the ground flax seed, baking powder, Italian seasoning, salt, and pepper until well combined.
3. Add the lightly beaten eggs, shredded mozzarella, grated Parmesan, and diced pepperoni to the dry . Stir until everything is just mixed together—be careful not to overmix.
4. Evenly spoon the mixture into the 12 prepared muffin cups, filling each about three-quarters full.
5. Bake for 18-20 minutes, or until the muffins are puffed up, golden brown, and a toothpick inserted into the center comes out clean.
6. Let them cool in the tin for a few minutes before serving. Enjoy warm on their own or with a simple green salad.

Nutritional Information

• Per serving (3 muffins)
• Calories: 254
• Fat: 19.1g
• Carbohydrate: 4.3g
• Dietary Fiber: 2.0g
• Net Carbs: 2.3g
• Protein: 16.8g

Pro Tips

• Use silicone muffin liners for the easiest, non-stick removal. If you don’t have them, be sure to grease your metal tin very well.
• Feel free to customize with other low-carb pizza toppings like chopped black olives, mushrooms, or green bell peppers.
• These muffins are fantastic for meal prep. Store them in an airtight container in the refrigerator for up to 4 days and reheat in the microwave or air fryer.
• For an extra pizza-like flavor, serve with a side of low-carb marinara sauce for dipping.

FAQ

Q: How do I store and reheat these keto pizza muffins
A: Store the muffins in an airtight container in the refrigerator for up to 4 days. For best results, reheat them in an air fryer or a preheated oven until warm and slightly crispy. You can also microwave them for a quick snack.

Q: Can I use a different flour instead of ground flax seed
A: This recipe is specifically designed to use ground flax seed as the low-carb binder. Substituting it with other flours like almond or coconut flour would significantly change the texture and require adjusting the liquid ratios, so we recommend sticking to flax for the best results.

Q: What other toppings can I add to these pizza muffins
A: Absolutely! Feel free to customize them with your favorite low-carb pizza toppings. Chopped black olives, sautéed mushrooms, diced green bell peppers, or even cooked sausage would be delicious additions. Just be mindful of any extra carbs they might add.

Q: Why are my pizza muffins sticking to the pan
A: These muffins can be sticky due to the high cheese and egg content. For the easiest, non-stick removal, we highly recommend using silicone muffin liners. If you are using a metal tin, be sure to grease it very thoroughly with butter, coconut oil, or a non-stick spray.

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